Abstract
The present study was conducted to determine the polymorphism and to explore the possible SNPs in prolactin gene among the Giriraja and Indigenous chicken using PCR-RFLP. About 80 birds each of Giriraja and Indigenous chicken were genotyped for promoter regions 1 and 2 (C-2402T and C- 2161G) of prolactin gene by employing published primers. The restriction enzymes, AluI and Csp6I were utilized for genotyping polymorphisms of C-2402T and C-2161G, respectively. At promoter region 1 (24 bp indel at -358) of prolactin gene, the proportions of DD and ID genotypes were higher in Giriraja (0.45) and Indigenous (0.44) chicken. However, the frequency of D allele (0.775 and 0.631) was higher in both the studied populations. Whereas, for promoter region 2 of prolactin gene, the frequencies of T allele (C-2402T) and G allele (C-2161G) were higher in Giriraja (0.806 and 0.694) and Indigenous (0.644 and 0.525) confirming that T alleles are predominant in native or indigenous chicken. Further, three SNPs, viz., C>T transition at 161 bp, T>C transition at 371 bp and C>G transversion at 402 bp were detected at promoter region 2 (C-2402T and C-2161G) in T/G allele compared to C allele.
KeywordsBroodinessGirirajaIndigenous chickenProlactin genePromoter
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